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18 Precision For Medicine Jobs
Senior Data Engineer
Precision For Medicine
posted 11d ago
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Job Description
Position Summary:
The Senior Data Engineer, Translational Data Services, will support the Translational Data Services team in implementation, maintenance, and monitoring of data standards across Precision for Medicine s laboratory services unit. This position will make a key contribution to implement and monitor standards and data transfer/QC processes to support Precision s laboratory sciences team to ensure delivery of high quality data to Precision s clients.
Essential functions of the job include but are not limited to:
- Create production-level source code for use in biomarker data management, and biomarker data delivery
- Work closely with our lab team to develop, execute and maintain custom pipelines for data processing and quality control (QC) pipelines for biomarker data such as flow cytometry, cell-based assays (e.g. MSD portfolio), next-generation sequencing, gene expression, and IHC
- Build data pipelines that clean, transform, aggregate or visualize data from disparate sources
- Support development and execution of data transfer agreements/specifications for internal and external data transfers
- Perform source code validation and application testing
- Collaborate and answer technical questions from members of other Precision divisions, and externally with 3rd party clients, vendors and auditors.
- Be an advocate for best practices and continued learning
- Be a point of contact for junior team members for all technical questions
- Other duties as assigned
Qualifications:
Minimum Required:
- Bachelor s in data management, Bioinformatics, Data Science, Biostatistics, Biology or related field with 6 years of relevant working experience
- OR
- Masters s in data management, Bioinformatics, Data Science, Biostatistics, Biology or related field with 3 years of relevant working experience
- Proven experience with programming languages such as R or Python and data visualization/exploration tools
- Proven experience with analyzing biological data, querying databases, writing API calls and using AWS ecosystem
- Experience with version control systems such as Git
- Experience using Linux and command line tools
- Strong communication skills, especially for explaining technical concepts to nontechnical teams
- Ability to work under tight deadlines, on a very dynamic, fast-paced team and handle multiple projects at the same time
Other Required:
- Ability to leverage existing technologies, internal and external, to address unique challenges
- A concern for the little differences in numbers that can uncover big issues
- Ability to identify problems and work with internal stakeholders to a resolution
- Excellent communication and interpersonal skills
- Team player contributing to a positive, collaborative working environment
- Must be able to read, write, speak fluently and comprehend the English language
- Experience interfacing with LIMS systems.
Employment Type: Full Time, Permanent
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